Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 32
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

19 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    63.2     19        0    2.3
Qui1     Qui    42.2     64        0    3.8
Qui2     Qui    50.0     30        0    2.3
Qui3     Qui    52.7    112        0    6.0
Qui4     Qui    56.4     55        0    3.0
Rio1     Rio    84.6     52        0    4.7
Rio2     Rio    72.7     66        0    4.3
Rio3     Rio    71.9     57        0    1.9
Rio4     Rio    76.3     76        0    3.8