Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 1
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     7.1     28        0   51.5
Qui1     Qui     5.3     19        0   46.0
Qui2     Qui    20.7     29        0   58.0
Qui3     Qui     4.5     22        0   41.0
Qui4     Qui     0.0     21        0   35.5
Rio1     Rio     7.4     27        0   58.0
Rio2     Rio    14.3      7        0   24.0
Rio3     Rio    31.2     16        0   36.0
Rio4     Rio    38.1     21        0   36.0