Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 11
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

16 CpGs in target; 10 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    85.3     68        0    3.6
Qui1     Qui    68.7    150        0    5.3
Qui2     Qui    64.7    153        0    5.4
Qui3     Qui    45.0    169        0    6.3
Qui4     Qui    73.1     78        0    3.7
Rio1     Rio    94.3    105        0    6.0
Rio2     Rio    95.9     74        0    2.7
Rio3     Rio    95.9     49        0    4.4
Rio4     Rio    87.6    105        0    4.9