Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 38
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

24 CpGs in target; 8 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    13.2     53        0    5.6
Qui1     Qui    52.6     76        0    7.9
Qui2     Qui    63.2     57        0    9.2
Qui3     Qui    50.0     70        0   10.4
Qui4     Qui    68.0     50        0    7.4
Rio1     Rio     6.2     32        0    6.6
Rio2     Rio     0.0     50        0    7.0
Rio3     Rio    11.1      9        0    4.3
Rio4     Rio     2.9     68        0    8.0