Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 42
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

23 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    38.2     34        0    5.6
Qui1     Qui     3.6     28        0    4.3
Qui2     Qui     0.0     41        0    3.7
Qui3     Qui    30.2     53        0    3.7
Qui4     Qui    28.6      7        0    3.1
Rio1     Rio    17.9     56        0    4.2
Rio2     Rio    30.2     63        0    4.6
Rio3     Rio     0.0     17        0    1.3
Rio4     Rio    43.5     69        0    5.2