Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 8
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    38.5     26        0   52.0
Qui1     Qui     9.1     11        0   34.5
Qui2     Qui    13.6     22        0   40.0
Qui3     Qui    10.5     19        0   38.5
Qui4     Qui     5.0     20        0   40.5
Rio1     Rio    50.0      6        0   19.0
Rio2     Rio    66.7     12        0   17.0
Rio3     Rio    37.5      8        0   20.5
Rio4     Rio    46.2     13        0   32.0