Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 10
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

7 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    88.9      9        0    2.8
Qui1     Qui    65.2     23        0    4.6
Qui2     Qui    80.0     15        0    2.8
Qui3     Qui    95.7     23        0    4.5
Qui4     Qui    63.6     11        0    2.1
Rio1     Rio   100.0     14        0    4.4
Rio2     Rio    95.7     23        0    4.4
Rio3     Rio   100.0     15        0    4.8
Rio4     Rio    84.6     13        0    3.6