Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 38
  seen in >= 2 oysters: 6
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

28 CpGs in target; 9 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     9.3     54        0    3.3
Qui1     Qui     0.0     25        0    5.1
Qui2     Qui     2.4     42        1    3.0
Qui3     Qui     3.6    110        0    6.4
Qui4     Qui     4.0     75        0    3.4
Rio1     Rio    15.6     77        0    5.8
Rio2     Rio    25.5     55        0    5.6
Rio3     Rio     3.7     27        0    2.6
Rio4     Rio    20.4     98        0    6.0