Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 8
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    27.3     11        0   12.0
Qui1     Qui    16.7      6        0    6.5
Qui2     Qui     0.0     14        0   15.0
Qui3     Qui     0.0      8        0    8.0
Qui4     Qui     0.0     10        0    9.5
Rio1     Rio    46.2     13        0   13.5
Rio2     Rio    50.0     10        0   11.0
Rio3     Rio    45.5     11        0   11.0
Rio4     Rio    71.4      7        0    8.0