Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 39
  seen in >= 2 oysters: 10
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

18 CpGs in target; 2 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    19.4    108        0    9.0
Qui1     Qui    15.5     58        0    8.4
Qui2     Qui    12.7     71        0    8.3
Qui3     Qui    13.6     59        0    7.8
Qui4     Qui     0.0     97        0    6.4
Rio1     Rio    31.1    119        1   10.5
Rio2     Rio    37.9     58        0    6.1
Rio3     Rio    46.2     52        0    7.2
Rio4     Rio    45.1     71        0    9.0