Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 27
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

18 CpGs in target; 6 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    50.0     82        0   11.5
Qui1     Qui     2.1     47        0    5.3
Qui2     Qui     0.0     23        0    7.0
Qui3     Qui     0.0     27        0    4.9
Qui4     Qui     5.0     40        0    7.0
Rio1     Rio    63.0     27        0    7.0
Rio2     Rio    54.7     64        0    7.5
Rio3     Rio    55.6     63        0    7.6
Rio4     Rio    50.9     55        0    8.2