pos ref alt in_target n_oysters_with_alt alt_freq_Pum alt_freq_Qui alt_freq_Rio pop_differentiated cpg_destroying Pum1 Qui1 Qui2 Qui3 Qui4 Rio1 Rio2 Rio3 Rio4 49860011 G A True 3 0.143 0.071 False True 0.00/1 0.25/4 0.00/5 0.25/4 0.00/2 0.00/4 0.00/4 0.25/4 49860021 G T True 1 0.0 0.231 False False 0.00/2 0.00/3 0.00/5 0.00/4 0.50/2 0.00/4 0.33/3 0.25/4 49860088 A C True 1 0.065 0.095 0.231 False False 0.06/31 0.00/20 0.00/19 0.22/32 0.08/24 0.50/42 0.08/26 0.12/40 0.12/26 49860103 G C True 1 0.0 0.067 False False 0.00/1 0.00/2 0.00/6 0.00/2 0.00/3 0.00/3 0.25/4 0.00/3 0.00/5 49860168 C A True 1 0.071 0.0 0.159 False False 0.07/28 0.00/15 0.00/20 0.00/32 0.00/27 0.41/51 0.00/29 0.07/44 0.00/27 49860219 G A True 0 0.3 0.083 False True 0.00/2 0.50/2 0.33/3 0.50/2 0.00/3 0.00/2 0.00/3 0.00/2 0.20/5 49860245 G T True 1 0.6 0.167 False False 1.00/1 0.50/2 0.67/3 0.50/2 0.67/3 0.50/2 0.00/3 0.00/3 0.25/4 49860284 C T True 4 0.176 0.274 0.118 False True 0.18/17 0.00/10 0.41/17 0.28/18 0.29/17 0.09/33 0.25/20 0.11/19 0.05/21 49860311 T C True 1 0.125 0.085 0.123 False False 0.12/16 0.00/8 0.21/14 0.00/15 0.10/10 0.04/26 0.08/13 0.17/12 0.29/14 49860359 C A True 1 0.125 0.267 0.125 False False 0.12/8 1.00/1 0.50/4 0.12/8 0.00/2 0.20/5 0.08/12 0.00/1 0.17/6 49860366 G A True 0 0.5 False True 0.00/1 0.50/2 0.00/1 1.00/1 0.00/1 49860370 G A True 0 0.25 False True 0.00/1 0.00/2 0.00/1 1.00/1 0.00/1 49860397 C A True 2 0.0 0.083 0.143 False False 0.00/4 0.00/5 0.00/1 0.25/4 0.00/2 0.17/6 0.29/7 0.00/1 0.00/7 49860500 T C True 1 0.0 0.0 0.043 False False 0.00/6 0.00/9 0.00/7 0.00/6 0.00/6 0.00/6 0.25/4 0.00/5 0.00/8 49860501 A C True 1 0.0 0.036 0.043 False False 0.00/6 0.00/9 0.00/7 0.17/6 0.00/6 0.00/6 0.25/4 0.00/5 0.00/8 49860509 T A True 1 0.333 0.0 0.0 False False 0.33/6 0.00/9 0.00/7 0.00/6 0.00/7 0.00/6 0.00/4 0.00/6 0.00/6 49860539 C A True 1 0.0 0.091 False False 0.00/1 0.00/3 0.00/5 0.00/3 0.00/6 0.00/1 0.00/2 0.00/4 0.25/4 49860543 A T True 1 0.0 0.091 False False 0.00/3 0.00/6 0.00/7 0.00/6 0.00/7 0.00/4 0.00/3 0.25/8 0.00/7 49860554 A G True 1 0.0 0.038 False False 0.00/3 0.00/6 0.00/7 0.00/5 0.00/9 0.00/6 0.25/4 0.00/9 0.00/7 49860565 C A True 1 0.0 0.059 False False 0.00/1 0.00/2 0.00/5 0.00/2 0.00/8 0.25/4 0.00/2 0.00/5 0.00/6 49860577 A G True 1 0.036 0.03 False False 0.00/2 0.00/5 0.00/7 0.20/5 0.00/11 0.00/8 0.25/4 0.00/11 0.00/10 49860615 C G True 1 0.056 0.0 False False 0.00/1 0.00/3 0.00/4 0.25/4 0.00/7 0.00/3 0.00/1 0.00/7 0.00/6 49860626 C A True 1 0.048 0.0 False False 0.00/1 0.25/4 0.00/6 0.00/4 0.00/7 0.00/3 0.00/2 0.00/6 0.00/6 49860630 G A True 1 0.0 0.1 False True 0.00/2 0.00/3 0.00/6 0.00/8 0.00/4 0.00/6 0.00/4 0.33/6 0.00/4 49860666 G T True 1 0.0 0.091 False False 0.00/2 0.00/3 0.00/9 0.00/9 0.00/5 0.00/7 0.00/5 0.40/5 0.00/5 49860672 G A True 1 0.0 0.095 False True 0.00/2 0.00/2 0.00/9 0.00/9 0.00/5 0.00/6 0.00/5 0.40/5 0.00/5 49860673 G T True 1 0.0 0.095 False False 0.00/2 0.00/2 0.00/9 0.00/9 0.00/5 0.00/6 0.00/5 0.40/5 0.00/5 49860765 C A True 1 0.0 0.0 0.125 False False 0.00/4 0.00/4 0.00/3 0.00/4 0.00/3 0.33/6 0.00/2 0.00/5 0.00/3 49860789 T C True 1 0.0 0.038 False False 0.00/3 0.00/7 0.00/6 0.00/8 0.00/4 0.00/9 0.00/7 0.25/4 0.00/6 49860798 G T True 1 0.0 0.091 False False 0.00/2 0.00/5 0.00/3 0.00/4 0.00/2 0.00/4 0.00/1 0.25/4 49860805 A T True 1 0.0 0.056 False False 0.00/2 0.00/4 0.00/4 0.00/7 0.00/5 0.00/6 0.00/6 0.00/2 0.25/4 49860833 A G True 1 0.087 0.0 False False 0.00/3 0.20/5 0.00/7 0.00/7 0.25/4 0.00/7 0.00/6 0.00/2 0.00/3 49860834 T A True 1 0.15 0.0 False False 0.00/3 0.40/5 0.00/5 0.00/7 0.33/3 0.00/6 0.00/6 0.00/2 0.00/3 49860843 T A True 1 0.043 0.0 False False 0.00/3 0.00/5 0.00/7 0.00/7 0.25/4 0.00/7 0.00/4 0.00/2 0.00/3 49860893 A G True 1 0.0 0.0 0.04 False False 0.00/4 0.00/5 0.00/8 0.00/8 0.00/5 0.00/8 0.00/6 0.25/4 0.00/7 49860919 T G True 1 0.25 0.0 0.0 False False 0.25/4 0.00/5 0.00/6 0.00/6 0.00/5 0.00/6 0.00/5 0.00/3 0.00/5 49860924 T G True 1 0.5 0.0 0.0 False False 0.50/4 0.00/4 0.00/5 0.00/6 0.00/5 0.00/7 0.00/4 0.00/3 0.00/5 49860948 C T True 1 0.25 0.0 0.0 False True 0.25/4 0.00/2 0.00/2 0.00/3 0.00/2 0.00/2 0.00/1 0.00/2 0.00/3 49860956 T C True 1 0.0 0.0 0.1 False False 0.00/7 0.00/1 0.00/3 0.00/4 0.00/3 0.00/8 0.40/5 0.00/3 0.00/4 49860964 T C True 1 0.0 0.111 False False 0.00/3 0.00/1 0.00/2 0.00/2 0.00/3 0.14/7 0.25/4 0.00/3 0.00/4 49860968 T A True 1 0.0 0.1 0.0 False False 0.00/8 0.00/1 0.00/2 0.25/4 0.00/3 0.00/6 0.00/3 0.00/3 0.00/4 49860969 T G True 1 0.0 0.1 0.0 False False 0.00/9 0.00/1 0.00/2 0.25/4 0.00/3 0.00/7 0.00/3 0.00/3 0.00/4 49860970 T A True 1 0.0 0.1 0.0 False False 0.00/8 0.00/1 0.00/2 0.25/4 0.00/3 0.00/6 0.00/3 0.00/3 0.00/4 49860971 T G True 1 0.0 0.091 0.0 False False 0.00/9 0.00/2 0.00/2 0.25/4 0.00/3 0.00/6 0.00/3 0.00/3 0.00/4