Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 34
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

26 CpGs in target; 21 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    80.6     98        0    7.5
Qui1     Qui    87.5     72        0    6.5
Qui2     Qui    92.0     75        0    8.4
Qui3     Qui    83.8     74        1    5.7
Qui4     Qui    82.1     78        0    4.7
Rio1     Rio    66.2     80        0    7.5
Rio2     Rio    44.2     52        0    6.1
Rio3     Rio    50.0     80        0    7.2
Rio4     Rio    37.9     87        0    8.0