Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 13
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

7 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum   100.0     40        0    8.3
Qui1     Qui    74.2     31        0    7.6
Qui2     Qui    62.7     51        0    8.8
Qui3     Qui    56.2     48        0   12.5
Qui4     Qui    59.5     42        0    8.0
Rio1     Rio    68.1     47        0   11.0
Rio2     Rio    83.3     30        0    9.4
Rio3     Rio   100.0     24        0    6.5
Rio4     Rio    74.2     31        0    9.9