Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 32
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

19 CpGs in target; 3 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    79.0     81        0    6.8
Qui1     Qui    76.9     39        0    5.6
Qui2     Qui    80.0    105        0    7.5
Qui3     Qui    87.3     71        1    5.7
Qui4     Qui    80.2     81        0    4.3
Rio1     Rio    30.7    114        0    8.1
Rio2     Rio    60.4     48        0    4.9
Rio3     Rio    44.8     58        1    5.0
Rio4     Rio    55.8    113        1    8.4