Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 22
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

13 CpGs in target; 10 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     1.5     67        0   10.9
Qui1     Qui     0.0     26        0    8.1
Qui2     Qui    23.4     64        0    9.2
Qui3     Qui    25.9     54        0   11.3
Qui4     Qui    30.0     20        0    8.0
Rio1     Rio     1.5     65        0   13.8
Rio2     Rio     0.0     36        0    9.5
Rio3     Rio     1.7     58        0    8.9
Rio4     Rio     0.0     43        0    8.6