Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 7
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    85.7      7        0    9.0
Qui1     Qui    50.0      2        1    6.0
Qui2     Qui     0.0      4        1   11.0
Qui3     Qui    57.1      7        1   21.0
Qui4     Qui     0.0      2        0    8.0
Rio1     Rio    85.7      7        1   11.0
Rio2     Rio    80.0      5        1    9.0
Rio3     Rio    71.4      7        1   11.0
Rio4     Rio    57.1      7        1   15.0