Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 38
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

27 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     1.9     54        0    4.6
Qui1     Qui     0.0     74        0    4.5
Qui2     Qui    25.0     52        0    3.3
Qui3     Qui    55.7     97        0    7.6
Qui4     Qui    15.0     40        0    4.0
Rio1     Rio     3.4     59        0    4.8
Rio2     Rio     1.7     58        0    4.9
Rio3     Rio     0.0     32        0    4.1
Rio4     Rio     0.0     62        0    5.4