Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 24
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

9 CpGs in target; 3 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    24.5     49        0    8.4
Qui1     Qui    73.1     26        0    6.7
Qui2     Qui    50.0     44        0    6.9
Qui3     Qui    59.6     52        0    6.3
Qui4     Qui    75.8     33        0    5.9
Rio1     Rio    84.6     39        0    5.7
Rio2     Rio    76.0     25        0    6.6
Rio3     Rio    84.2     19        0    4.2
Rio4     Rio    82.6     23        0    5.5