Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 20
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

14 CpGs in target; 8 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    64.0     25        0    5.3
Qui1     Qui    27.1     48        0    6.2
Qui2     Qui    31.8     44        0    7.0
Qui3     Qui    40.0     45        0    7.4
Qui4     Qui    47.9     48        0    5.7
Rio1     Rio    62.9     62        0    9.9
Rio2     Rio    55.2     58        0    9.2
Rio3     Rio    54.5     33        0    5.3
Rio4     Rio    40.5     37        0    5.4