Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 25
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

17 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    84.0     50        0    6.7
Qui1     Qui    74.4     39        0    4.5
Qui2     Qui    50.0     28        0    3.6
Qui3     Qui    44.4     45        0    6.8
Qui4     Qui    70.0     40        0    6.1
Rio1     Rio    67.6     71        0    7.2
Rio2     Rio    72.7     55        0    6.3
Rio3     Rio    63.6     33        0    5.1
Rio4     Rio    60.7     61        0    7.7