Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 27
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

10 CpGs in target; 7 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    73.3     45        0    8.4
Qui1     Qui    83.3     24        0    4.6
Qui2     Qui    84.6     39        0    8.4
Qui3     Qui    85.0     60        0   10.4
Qui4     Qui    84.4     32        0    6.7
Rio1     Rio    67.6     34        0    6.3
Rio2     Rio    67.6     37        0    7.0
Rio3     Rio    82.9     41        0    6.4
Rio4     Rio    72.5     40        0    7.0