Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 17
  seen in >= 2 oysters: 8
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 22 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    43.0    200        1   16.1
Qui1     Qui    22.9    157        0   11.6
Qui2     Qui    25.9    286        1   19.2
Qui3     Qui    17.4    207        0   15.9
Qui4     Qui    20.0    135        0   10.7
Rio1     Rio    45.2    210        1   19.9
Rio2     Rio    46.4    138        0   14.0
Rio3     Rio    35.5    197        0   16.5
Rio4     Rio    47.5    181        0   15.2