Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 37
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

19 CpGs in target; 3 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     34        0    1.4
Qui1     Qui     2.9     35        0    2.3
Qui2     Qui     0.0     42        0    3.3
Qui3     Qui     1.3     77        0    7.4
Qui4     Qui     0.0     44        0    4.2
Rio1     Rio    29.5     61        0    6.7
Rio2     Rio    31.4     86        0    5.9
Rio3     Rio    61.5     52        0    4.1
Rio4     Rio     0.0     44        0    2.5