Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 33
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

68 CpGs in target; 7 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     60        0    2.1
Qui1     Qui    43.7     87        0    3.8
Qui2     Qui    10.7     28        0    2.8
Qui3     Qui    38.9     95        2    3.9
Qui4     Qui     0.0     41        0    2.9
Rio1     Rio    73.7     57        0    5.2
Rio2     Rio    65.7     70        0    3.6
Rio3     Rio    85.3     34        0    4.2
Rio4     Rio    84.9     73        0    5.0