Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 42
  seen in >= 2 oysters: 12
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

24 CpGs in target; 10 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    75.0    128        0   12.1
Qui1     Qui    44.2     52        0    5.5
Qui2     Qui    55.1    118        0    9.8
Qui3     Qui    12.9     31        0    3.6
Qui4     Qui    25.0     80        0    8.5
Rio1     Rio    77.6    156        0   15.8
Rio2     Rio    56.2     73        0    6.9
Rio3     Rio    66.1    109        0    8.2
Rio4     Rio    73.3    172        0   13.0