Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 39
  seen in >= 2 oysters: 6
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

10 CpGs in target; 7 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    10.3     39        0    9.3
Qui1     Qui    69.6     46        0    6.6
Qui2     Qui    73.5     34        0    5.9
Qui3     Qui    33.3     21        0    4.5
Qui4     Qui    57.1     42        0    7.1
Rio1     Rio    30.9     55        0    7.4
Rio2     Rio    37.0     27        0    4.7
Rio3     Rio    34.5     29        0    4.5
Rio4     Rio    45.2     31        0    6.7