Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 2
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    66.7     12        0   27.0
Qui1     Qui    75.0      8        0   14.5
Qui2     Qui   100.0      8        0   17.0
Qui3     Qui    50.0      4        0   11.0
Qui4     Qui   100.0      4        0   17.0
Rio1     Rio    44.4      9        0   19.0
Rio2     Rio    40.0      5        0   11.0
Rio3     Rio    57.1      7        0   15.0
Rio4     Rio    50.0      6        0   18.0