Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 30
  seen in >= 2 oysters: 5
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

12 CpGs in target; 8 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    52.7     55        0    7.2
Qui1     Qui    36.0     25        1    6.2
Qui2     Qui    25.8     31        0    5.7
Qui3     Qui    31.2     64        0    6.8
Qui4     Qui    38.3     47        0    6.5
Rio1     Rio    19.8     81        1    8.9
Rio2     Rio    53.8     13        0    3.2
Rio3     Rio    26.9     26        0    3.9
Rio4     Rio    14.3     63        0    7.3