Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 24
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

16 CpGs in target; 3 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    70.0     10        0    7.2
Qui1     Qui    81.2     32        0    4.9
Qui2     Qui    77.8     18        0    3.9
Qui3     Qui    21.4     14        0    6.2
Qui4     Qui    47.4     19        0    5.9
Rio1     Rio    56.2     32        0    6.3
Rio2     Rio    70.8     24        0    6.8
Rio3     Rio   100.0      6        2    4.9
Rio4     Rio    80.8     52        0    6.7