Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 36
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

36 CpGs in target; 9 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    48.4     64        0    3.9
Qui1     Qui    16.8    107        0    5.5
Qui2     Qui    28.4     88        0    4.9
Qui3     Qui    35.7     84        0    4.4
Qui4     Qui    28.4     74        0    4.4
Rio1     Rio    64.9    131        0    7.2
Rio2     Rio    44.0     84        0    4.5
Rio3     Rio    51.7     29        0    2.4
Rio4     Rio    38.8     67        0    5.1