Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 71
  seen in >= 2 oysters: 14
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

17 CpGs in target; 13 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    64.3     70        0    7.5
Qui1     Qui    69.1     55        2    6.3
Qui2     Qui    61.2     49        0    5.5
Qui3     Qui    78.5     93        0    8.2
Qui4     Qui    84.0     50        0    7.3
Rio1     Rio    75.5     53        0    6.3
Rio2     Rio    63.3     30        1    6.1
Rio3     Rio    55.3     38        2    4.7
Rio4     Rio    59.3     54        0    9.6