Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 34
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

12 CpGs in target; 9 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    56.1     41        0    6.5
Qui1     Qui    70.0     30        0    6.0
Qui2     Qui    68.1     47        0    8.6
Qui3     Qui    66.2     68        0   10.2
Qui4     Qui    66.7     24        0    5.2
Rio1     Rio    33.3     63        0    8.4
Rio2     Rio    53.8     65        0    8.3
Rio3     Rio    52.9     34        0    5.7
Rio4     Rio    54.1     37        0    6.4