Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 30
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

25 CpGs in target; 3 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    50.0     64        0    7.6
Qui1     Qui    65.6     61        0    7.9
Qui2     Qui    64.2     67        0    5.4
Qui3     Qui    48.6     72        0    7.0
Qui4     Qui    53.0     66        0    7.0
Rio1     Rio    85.0    113        0    7.4
Rio2     Rio    68.0    103        0    6.1
Rio3     Rio    71.6    102        0    5.7
Rio4     Rio    68.2     85        0    7.3