Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 28
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

21 CpGs in target; 12 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    10.4     48        0    5.8
Qui1     Qui     1.3     75        0    4.2
Qui2     Qui    32.4     34        0    5.3
Qui3     Qui    43.8     64        0    8.0
Qui4     Qui    61.4    101        0    7.8
Rio1     Rio     6.1     99        0    7.8
Rio2     Rio     1.5     66        0    5.7
Rio3     Rio     4.4     45        0    4.7
Rio4     Rio     2.7     37        0    4.6