Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 23
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

18 CpGs in target; 11 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    86.7     45        0    9.0
Qui1     Qui    53.2     47        0    7.4
Qui2     Qui    76.7     86        0   10.1
Qui3     Qui    56.0     75        0   10.7
Qui4     Qui    19.4     72        0    7.9
Rio1     Rio    92.4     92        0   10.4
Rio2     Rio    95.1     41        0    5.8
Rio3     Rio    96.7     30        0    7.2
Rio4     Rio    91.2     80        0   10.0