Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 27
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

10 CpGs in target; 7 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    64.7     51        0    7.7
Qui1     Qui    62.5     24        0    5.6
Qui2     Qui    37.2     43        0    7.7
Qui3     Qui    33.3     36        0    5.8
Qui4     Qui    52.6     38        0    7.6
Rio1     Rio    55.9     34        0    8.2
Rio2     Rio    72.1     61        0    9.6
Rio3     Rio    60.5     38        0    7.3
Rio4     Rio    68.9     45        0    9.8