Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 26
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

23 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     29        0    3.6
Qui1     Qui    30.0     50        0    7.4
Qui2     Qui    81.5     65        0    8.2
Qui3     Qui    48.7     39        0    7.2
Qui4     Qui     0.0     12        0    3.3
Rio1     Rio     0.0     31        0    6.2
Rio2     Rio     2.7     37        0    6.1
Rio3     Rio     0.0     31        0    5.7
Rio4     Rio     0.0     26        0    6.5