Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 16
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

7 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    81.8     33        0    6.4
Qui1     Qui    38.2     34        0    7.9
Qui2     Qui    37.5     40        0    8.9
Qui3     Qui    32.5     40        0    8.1
Qui4     Qui    50.0     18        0    5.7
Rio1     Rio    70.7     41        0   10.0
Rio2     Rio    64.7     34        0    6.4
Rio3     Rio    58.5     41        0    8.2
Rio4     Rio    61.5     26        0    9.7