Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 20
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

24 CpGs in target; 15 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     3.7    135        0    7.7
Qui1     Qui    43.7    126        0    7.7
Qui2     Qui    55.6    169        0    9.9
Qui3     Qui    54.2    155        0   11.3
Qui4     Qui    92.6    108        0    8.5
Rio1     Rio     6.8     88        0    7.9
Rio2     Rio     4.4    229        0   13.2
Rio3     Rio     4.5    133        0    8.0
Rio4     Rio     3.4    174        0   11.0