Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 40
  seen in >= 2 oysters: 12
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

19 CpGs in target; 7 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    76.0     25        1    4.8
Qui1     Qui    70.6     68        1    6.9
Qui2     Qui    76.2     42        0    5.8
Qui3     Qui    64.5     31        0    6.8
Qui4     Qui    72.6     62        0    9.2
Rio1     Rio     0.0     25        2    5.1
Rio2     Rio     0.0     43        1    5.7
Rio3     Rio     0.0      9        0    3.6
Rio4     Rio     0.0     42        0    8.2