Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 43
  seen in >= 2 oysters: 6
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

62 CpGs in target; 7 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     18        0    2.0
Qui1     Qui    31.6    187        0    3.8
Qui2     Qui    13.8     80        0    2.6
Qui3     Qui    66.0    106        1    2.1
Qui4     Qui    43.5     92        0    2.3
Rio1     Rio    74.0    154        0    4.6
Rio2     Rio    54.2     48        0    1.2
Rio3     Rio    89.6    135        0    3.3
Rio4     Rio    76.0    129        0    2.5