Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 37
  seen in >= 2 oysters: 6
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

50 CpGs in target; 17 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.6    159        0    6.1
Qui1     Qui    26.9    219        0   14.8
Qui2     Qui     0.0     36        1    3.8
Qui3     Qui    25.2    103        0   10.7
Qui4     Qui     3.6    110        0    4.7
Rio1     Rio     1.2    250        1   15.7
Rio2     Rio     1.0    105        1    8.1
Rio3     Rio     0.6    160        1    6.3
Rio4     Rio     0.6    172        2    9.9