Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 27
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

8 CpGs in target; 6 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    75.6     45        0    8.5
Qui1     Qui    79.4     34        0    7.4
Qui2     Qui    56.2     32        0    9.0
Qui3     Qui    88.2     34        0    7.0
Qui4     Qui    84.2     38        0    6.7
Rio1     Rio    24.6     69        0   15.7
Rio2     Rio    62.8     43        0    7.8
Rio3     Rio    44.4     27        0    5.2
Rio4     Rio    39.6     53        0   13.6