Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 25
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

35 CpGs in target; 9 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     5.3     38        0    2.3
Qui1     Qui     4.0     75        0    5.2
Qui2     Qui     0.0     29        0    3.7
Qui3     Qui     0.0     77        0    4.0
Qui4     Qui     1.4     71        0    3.4
Rio1     Rio    64.8    142        0    7.1
Rio2     Rio    41.7     96        0    5.6
Rio3     Rio    43.5     46        0    3.4
Rio4     Rio     2.2     89        0    4.0