Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 24
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

12 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum              0        0    0.0
Qui1     Qui     1.1     91        0    8.0
Qui2     Qui     3.1     64        0    6.5
Qui3     Qui     1.5    201        0   18.8
Qui4     Qui     2.6     38        0    5.5
Rio1     Rio    31.8     85        0    7.3
Rio2     Rio     0.0     34        0    4.6
Rio3     Rio    42.6     54        0    5.4
Rio4     Rio    10.6     47        0    3.9