Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 27
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

32 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     1.3    157        0    5.5
Qui1     Qui    39.0    141        0    7.3
Qui2     Qui    61.6    112        0    6.0
Qui3     Qui    68.2    148        0    6.6
Qui4     Qui    41.9     74        0    3.9
Rio1     Rio     0.3    322        0   12.3
Rio2     Rio     4.5    177        0    8.4
Rio3     Rio     3.6    165        0    6.8
Rio4     Rio     1.1    174        0    7.8