Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 19
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

5 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    38.1     21        1    9.8
Qui1     Qui    54.5     11        0    6.7
Qui2     Qui    39.1     23        0    8.6
Qui3     Qui     7.7     13        0    9.6
Qui4     Qui     6.7     15        0    8.2
Rio1     Rio    25.0     12        0    8.2
Rio2     Rio    45.5     11        0    6.6
Rio3     Rio    44.4     18        0    9.8
Rio4     Rio    47.8     23        0    9.0