Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 43
  seen in >= 2 oysters: 8
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

15 CpGs in target; 2 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    67.7     31        0    6.7
Qui1     Qui    47.5     40        0    7.0
Qui2     Qui    17.2     29        0    4.0
Qui3     Qui    16.7     48        0    6.3
Qui4     Qui    30.0     30        0    7.7
Rio1     Rio    31.7     60        0    5.6
Rio2     Rio    50.0     18        0    5.9
Rio3     Rio    52.5     40        0    4.9
Rio4     Rio    29.6     27        0    5.9