Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 27
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

27 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    64.1     39        1    4.4
Qui1     Qui    28.6     21        1    4.3
Qui2     Qui    85.7      7        0    3.7
Qui3     Qui    52.4     21        1    6.0
Qui4     Qui   100.0      2        1    5.6
Rio1     Rio     0.0      2        1    3.8
Rio2     Rio     0.0     21        1    4.2
Rio3     Rio    48.1     27        1    6.1
Rio4     Rio     0.0      2        1    5.8